Difference between revisions of "Gitlab Repository Biofysica/experiment"
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| + | back to [[Gitlab Repository Biofysica]] | ||
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==Description== | ==Description== | ||
| − | == | + | The Repository Biofysica/experiment contains code for experiments and experimental devices. |
| + | |||
| + | Experiments: | ||
| + | *SpherePrime | ||
| + | *SphereTTL | ||
| + | *SphereMinor | ||
| + | *NewSpherePrime | ||
| + | *SLIMS | ||
| + | *ripple_prt_experiment | ||
| + | *Experiment generator (Exp) | ||
| + | *psychoILD | ||
| + | *HRTF | ||
| + | *EEG | ||
| + | |||
| + | Devices: | ||
| + | *Panasonic PLC Led controller | ||
| + | *DCN-LED Led controller | ||
| + | *Panasonic Servomotors (Vestibular Chair and Speaker Arm) | ||
| + | *Pupillabs | ||
| + | |||
| + | Other: | ||
| + | *BIOX toolbox for RZ6 | ||
| + | *HDF5 file format toolbox | ||
| + | *Ini-file format toolbox | ||
| + | *FileIO utilities | ||
| + | *IP utilities | ||
| + | *Modbus utilities | ||
| + | *Mewtocol utilities | ||
| + | *LSL utilities | ||
| + | |||
| + | ==Biofysica/experiment content== | ||
===+zmq=== | ===+zmq=== | ||
Part of asynchronous messaging library ZeroMQ | Part of asynchronous messaging library ZeroMQ | ||
===SLIMS=== | ===SLIMS=== | ||
| − | Software for the SLIMS project by Jesse Jansen | + | Software for the SLIMS project by Jesse Jansen. |
| + | SLI-MS is an experiment to detect visual/oculomotor issues in multiple sclerosis (the MS in SLIMS) patients using an eye tracker (Pupil Labs) and Psychtoolbox. | ||
| + | |||
===biox_rz6=== | ===biox_rz6=== | ||
BIOX (BIOphysics eXperiments) Software for programming the RZ6 Multi I/O processor | BIOX (BIOphysics eXperiments) Software for programming the RZ6 Multi I/O processor | ||
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===spherePrime=== | ===spherePrime=== | ||
| − | Matlab files for the | + | Matlab files for the Old SpherePrime program for use in the [[Sphere lab|Auditory Sphere Lab]]. |
===spherePrimeNew/V1.13=== | ===spherePrimeNew/V1.13=== | ||
| + | Matlab files for the new SpherePrime program for use in the [[Sphere lab|Auditory Sphere Lab]]. | ||
| + | |||
===sphereTTL=== | ===sphereTTL=== | ||
| + | SphereTTL is a variant of SpherePrime with a time to live (TTL) function build in making short ( <10ms) LED stimuli. | ||
| + | |||
===stripchart=== | ===stripchart=== | ||
| + | Matlab code of a class for plotting of real time data. | ||
| + | |||
===tcp_udp_ip=== | ===tcp_udp_ip=== | ||
| + | Communication software for remote control of the Vestibular Chair computer. | ||
| + | |||
===tdt=== | ===tdt=== | ||
| + | Matlab code for controlling System3, RZ6, Zbus hardware of TDT (Tucker Davis Technologies). | ||
| + | |||
===test=== | ===test=== | ||
| + | Matlab files for testing the EEG Mobita with an oddball experiment. | ||
| + | |||
===usb=== | ===usb=== | ||
| + | Matlab file for support of the FTDI FT232 USB-Serial Interface. | ||
| + | |||
===vocoder_RL=== | ===vocoder_RL=== | ||
| + | Matlab code for a simple vocoder developed by Ruurd Lof. | ||
| + | |||
===zeromq=== | ===zeromq=== | ||
| + | This directory contains jeromq, a zeromq implementation in java that runs from Matlab. | ||
| + | |||
===zmqcmd=== | ===zmqcmd=== | ||
| + | This directory contains matlab code for zeromq. | ||
| + | |||
===zmqrpi=== | ===zmqrpi=== | ||
| + | This directory contains matlab code for LSL (Labstreaming Layer) making use of zeromq. | ||
Latest revision as of 09:41, 23 January 2024
back to Gitlab Repository Biofysica
Description
The Repository Biofysica/experiment contains code for experiments and experimental devices.
Experiments:
- SpherePrime
- SphereTTL
- SphereMinor
- NewSpherePrime
- SLIMS
- ripple_prt_experiment
- Experiment generator (Exp)
- psychoILD
- HRTF
- EEG
Devices:
- Panasonic PLC Led controller
- DCN-LED Led controller
- Panasonic Servomotors (Vestibular Chair and Speaker Arm)
- Pupillabs
Other:
- BIOX toolbox for RZ6
- HDF5 file format toolbox
- Ini-file format toolbox
- FileIO utilities
- IP utilities
- Modbus utilities
- Mewtocol utilities
- LSL utilities
Biofysica/experiment content
+zmq
Part of asynchronous messaging library ZeroMQ
SLIMS
Software for the SLIMS project by Jesse Jansen. SLI-MS is an experiment to detect visual/oculomotor issues in multiple sclerosis (the MS in SLIMS) patients using an eye tracker (Pupil Labs) and Psychtoolbox.
biox_rz6
BIOX (BIOphysics eXperiments) Software for programming the RZ6 Multi I/O processor
- Matlab interface
- RZ6 circuits
- User Manual
- Tutorial
exp
Matlab files for generating experiment files for SpherePrime and SphereMinor
fileio
Matlab utilities for file io
getip
IP related files: getip function for Matlab and C for different platforms.
gui
Matlab files for several SpherePrime gui's.
hdf5
Contains Matlab file for using the HDF5 file format. The Hierarchical Data Format version 5 (HDF5), is an open source file format that supports large, complex, heterogeneous data.
iniconfig
Matlab file for reading and writing *.ini files and an example ini-file. This allows you to create configurations of settings, and to manage them.
led
Matlab files for controlling LED's with the Panasonic PLC (ledcontroller.m) or the DCN-LedBox (ledcontroller_pi.m).
lsl-helper-plugins
Plugins for using LSL with Optitrack/Motive and PupilLabs devices.
lsl
Matlab software for using LSL (Labstreaming Layer)
mewtocol
Matlab software for the Mewtocol protocol for communication with Panasonic PLS's.
modbus
Matlab software for the Modbus protocol for communication with Panasonic PLS's.
psychoILD
Matlab software for a ILD (interaural level differences) experiments.
pupil_labs
Matlab software for reading and converting PupilLabs data.
ripple
Matlab file for a ripple sound experiment.
rpvsdex
Collection of rpvsdex files for TDT RP2.1 and RZ6 devices. Several circuit variants used in SpherePrime, SphereMinor, PsychoILD, EEG etc...
servomotors
Matlab files for controlling the panasonic servo motors of the Vestibular Chair and the SpeakerRobotArm
setup
Matlab files for localization of speakers and led's in several Labs.
sound
Matlab files for generating different sounds, like tones, ripples, sweeps. And frequency equalizers.
sphere Panasonic PLC
FPWIN PRO7 program files for the Panasonic PLC (=led controller) in the Auditory Sphere Lab.
sphereMinor
Matlab files for the SphereMinor program for use in the Auditory Perception Lab.
spherePrime
Matlab files for the Old SpherePrime program for use in the Auditory Sphere Lab.
spherePrimeNew/V1.13
Matlab files for the new SpherePrime program for use in the Auditory Sphere Lab.
sphereTTL
SphereTTL is a variant of SpherePrime with a time to live (TTL) function build in making short ( <10ms) LED stimuli.
stripchart
Matlab code of a class for plotting of real time data.
tcp_udp_ip
Communication software for remote control of the Vestibular Chair computer.
tdt
Matlab code for controlling System3, RZ6, Zbus hardware of TDT (Tucker Davis Technologies).
test
Matlab files for testing the EEG Mobita with an oddball experiment.
usb
Matlab file for support of the FTDI FT232 USB-Serial Interface.
vocoder_RL
Matlab code for a simple vocoder developed by Ruurd Lof.
zeromq
This directory contains jeromq, a zeromq implementation in java that runs from Matlab.
zmqcmd
This directory contains matlab code for zeromq.
zmqrpi
This directory contains matlab code for LSL (Labstreaming Layer) making use of zeromq.